izhikevich model

SpikeFun 1.05 release comes with the first version of DigiCortex SDK. With DigiCortex SDK it is now possible to connect to the running simulation and obtain information about neuron states, inject current into any compartment and get spiking information. Click on the title to read more...

DigiCortex Engine can be used to model some of the emergent phenomena of the developing cortex. In this article we show how spontaneous orientation sensitivity of the primary visual cortex (V1) cells develops in presence of natural video signal and voltage-dependent spike-timing dependent plasticity (vSTDP). Click on the title to read more...

SpikeFun v0.91 is out and brings support for more advanced long-term plasticity - Voltage-based STDP (based on the model of Clopath et. al). Voltage-based STDP is in agreement with more experimental data than conventional STDP models that consider spike timing only.

SpikeFun v0.90 is out and brings support for more advanced pyramidal neuron morphologies such as apical tufts and dendritic tree branching. In addition, new milestone has been reached - simulation with 3.52 billion synapses, which is just some 0.5 billion synapses shy of the current built-in simulation limits. Click on the title to find out more!

SpikeFun and its DigiCortex engine have been scaled to accommodate simulation of 16.7 million multi-compartment neurons with 2.1 billion synapses. To my best knowledge, this is the largest-scale simulation of cortical neurons on a home PC. Click on the title to find out more!

SpikeFun is now 1 years old! This article goes through the progress of the DigiCortex library and SpikeFun demo simulator in the last year and also describes some of the ideas that will be implemented in the future. Click on the title to find out more!

SpikeFun v0.82 brings support for modeling of brainstem nuclei - in this early phase, only one nuclei is supported (Pedunculopontine Tegmental Nucleus - PPTN). PPTN nuclei was chosen as the first because it sends strongs projections to Thalamus and represents one of the key hubs of the ascending arousal system and, as such, is implicated in core conciousness mechanisms such as awareness. Click on the title to find out more!

SpikeFun v0.80 comes with the first (pre-alpha) preview of the future simulation-modelling GUI (DigiCortexIDE binary). At the moment, new GUI is not offering much of the planned functionality but even to get to this point, big changes were made under-the-hood so DigiCortex can become usable outside simple "demo app" environment. Another change is the new algorithm for tracking subcortical white matter connectivity, allowing for identification of thalamic nuclei (still in very early phase - and error prone). Click on the title to find out more!

SpikeFun v0.77 brings the open and extensible XML-based project configuration system, allowing deep access to the neuronal simulation configuration as well as possibilities of extending and/or changing the simulation behavior. Furthermore, entire neuron library is now open and defined in XML models, allowing for many interesting experiments... click on the title to find out more!

SpikeFun v0.57 has just been released and it is loaded with new features ranging from the new network generation algorithm all the way down to the new command line interface... click on the title to find out what's new!